BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012G11LP1|AL426422
(820 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1592 1463 0.0
>3x_Contig1592
Length = 12307
Score = 1463 bits (725), Expect = 0.0
Identities = 783/816 (95%), Gaps = 1/816 (0%)
Strand = Plus / Plus
Query: 5 acgttcaaaagaagcgggattagaaaggagataacagagaaaaaaaagtaacacgaagcg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5006 acgttcaaaagaagcgggattagaaaggagataacagagaaaaaaaagtaacacgaagcg 5065
Query: 65 accctttaagagagamaaggaagaagcatcagagaggcggaggactactattttaaatga 124
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5066 accctttaagagagaaaaggaagaagcatcaaagaggcggaggactactattttaaatga 5125
Query: 125 ggtgaaaagggttaaattgtagagagtagcgcgtacaacctagtttatgaatcattttaa 184
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 5126 ggtgaaaagggttaaattgtagagagtagcgcgtagcaactagtttatgaatcattttaa 5185
Query: 185 ctggcaagacaaggttaatgtcgtcgtttttgttttttttagcmaataccgatgagtttg 244
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 5186 ctggcaagacaaggttaatgtcgtcgtttttgttatttttagcaaataccgatgagtttg 5245
Query: 245 tacggctaaacttttcagaaaggcatgtmgtttgcmatgatcggccggcacgagtaggat 304
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 5246 tacggctaaacttttcagaaaggcatgtagtttgcaatgatcggccggcacgagtaggat 5305
Query: 305 ggttagcmattaccgagtagagtgaggagggagagaatgccaaggcgcttgataatatga 364
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5306 ggttagcaattaccgagtagagtgaggagggagagaatgccaagg-gcttgataatatga 5364
Query: 365 mgcgcmaggggtggctggcgaggggtaaactgaggggtgcacccgamcttgctttcccgt 424
|||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5365 agcgcaaggggtggctggcgaggggtaaactgaggggtgcacccgaacttgctttcccgt 5424
Query: 425 ttcctcctatggttgcgatactactttgtgtatgtcataagcmggtcaccgggtaatatt 484
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 5425 ttcctcctatggttgcgatactactttgtgtatgtaataagcaggtcaccgggtaatatt 5484
Query: 485 gcmctacagatactaaagtatagcmataacggagaaaatgtgtgagtttatccgaatact 544
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5485 gcactacagatactaaagtatagcaataacggagaaaatgtgtgagtttatccgaatact 5544
Query: 545 gamatccggtcgggtaaattmggggaagagggccacacagammgmcgttgatcacgtgcm 604
|| ||||||||||||||||| |||||||||||| ||||||| | |||||||||||||
Sbjct: 5545 gaaatccggtcgggtaaattaggggaagagggcaacacagaaagaagttgatcacgtgca 5604
Query: 605 tgcacgtgatccncttctttctgtattctttttctttttcttcgttaagtattatccggg 664
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5605 tgcacgtgatcaacttctttctgtattctttttctttttcttcgttaagtattatccggg 5664
Query: 665 taamamcaatgtattaaamgacagggaacgagaagatagcggaaaagatgcmaaaaaaac 724
||| | |||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 5665 taacaccaatgtattaaacgacagggaacgagaagatagcggaaaagatgccaaaaaaac 5724
Query: 725 gaaaaacacagtactcgaagtactgaaattcttcgagtatcaaattttgttcagttcgcg 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5725 gaaaaacacagtactcgaagtactgaaattcttcgagtatcaaattttgttcagttcgcg 5784
Query: 785 tatatttctctgtacaggctatatatgggamgttga 820
|||||||||||||||||||||||||||||| |||||
Sbjct: 5785 tatatttctctgtacaggctatatatgggacgttga 5820
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5429
Number of Sequences: 1807
Number of extensions: 5429
Number of successful extensions: 178
Number of sequences better than 1.0e-20: 1
length of query: 820
length of database: 10,358,551
effective HSP length: 16
effective length of query: 804
effective length of database: 10,329,639
effective search space: 8305029756
effective search space used: 8305029756
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 50 (101.4 bits)